A comprehensive introduction to modern applied statistical genetic data analysis, accessible to those without a background in molecular biology or genetics. Human genetic research is now relevant beyond biology, epidemiology, and the medical sciences, with applications in such fields as psychology, psychiatry, statistics, demography, sociology, and economics. With advances in computing power, the availability of data, and new techniques, it is now possible to integrate large-scale molecular genetic information into research across a broad range of topics. This book offers the first comprehensive introduction to modern applied statistical genetic data analysis that covers theory, data preparation, and analysis of molecular genetic data, with hands-on computer exercises. It is accessible to students and researchers in any empirically oriented medical, biological, or social science discipline; a background in molecular biology or genetics is not required. The book first provides foundations for statistical genetic data analysis, including a survey of fundamental concepts, primers on statistics and human evolution, and an introduction to polygenic scores. It then covers the practicalities of working with genetic data, discussing such topics as analytical challenges and data management. Finally, the book presents applications and advanced topics, including polygenic score and gene-environment interaction applications, Mendelian Randomization and instrumental variables, and ethical issues. The software and data used in the book are freely available and can be found on the book's website.
The Handbook for Statistical Genetics is widely regarded as the reference work in the field. However, the field has developed considerably over the past three years.
Introduction to Statistical Methods in Modern Genetics makes a clear distinction between the necessary and unnecessary complexities. The author keeps the derivations of methods simple without losing the mathematical details.
This book covers the statistical models and methods that are used to understand human genetics, following the historical and recent developments of human genetics.
This book presents fundamental concepts and principles in this emerging field at a level that is accessible to students and researchers with a first course in biostatistics.
This book fills the gap between textbooks of quantitative genetic theory, and software manuals that provide details on analytical methods but little context or perspective on which methods may be most appropriate for a particular ...
The Handbook of Statistical Genomics is an excellent introductory text for advanced graduate students and early-career researchers involved in statistical genetics.
The book covers topics from R programming, to machine learning and statistics, to the latest genomic data analysis techniques. The text provides accessible information and explanations, always with the genomics context in the background.
Table 4.15 Pearson residuals and corresponding p-values for all 27 observed and expected counts Coat color MLG Pearson residual T AdjR p-value (normal) p-value (exact) Chocolate (0,1) 4.451 8.55E−06 4.20E−04 Yellow (1,0) 3.703 ...
This second edition expands the original edition by over 100 pages and includes new material. Sprinkled throughout the chapters are many new problems.
With clear explanations, a multitude of figures, and exercise sets in each chapter, this text forms an outstanding entrée into the rapidly expanding world of genetic data analysis.