This work pulls together all of the vital information about the most commonly used databases, analytical tools, and tables used in sequence analysis.
Sequence Analysis in a Nutshell: A Guide to Common Tools and Databases pulls together all of the vital information about the most commonly used databases, analytical tools, and tables used in sequence analysis.The book is partitioned into ...
BLAT: the BLAST-like alignment tool. Genome Res 12(4), 656-664. Markel, S. and D. Leon (2003). Sequence Analysis in a Nutshell: A Guide to Tools and Databases. Farnham and Sebastopol, CA,O'Reilly. Nawrocki, E. P., D. L. Kolbe and S. R. ...
Curr Bioinforma 2:49–61 Gupta AK, Nadarajah S (2004) Handbook of beta distribution and its applications. Marcel Dekker, New York Han X (2006) Inferring species phylogenies: a microarray approach. Computational intelligence and ...
He is a co-author, with Scott Markel, of Sequence Analysis in a Nutshell: A Guide to Common Tools and Databases. He has also taught at the University of California Santa Cruz Extension and at other colleges in northern California.
26: 1107-1115. Madej, T., Gibrat, J.F. and Bryant, S.H. (1995) Threading a database of protein cores. Proteins, 23: 356-369. Markel, S. and Leon, D. (2003) Sequence Analysis in a nutshell: a guide to common tools and databases.
In: Brockmann H, Delhey J (eds) Human happiness and the pursuit of maximization: is more always better? ... Edward Elgar Publishing, Cheltenham, p 223 Safire W (2004) The right word in the right place at the right time: wit and wisdom ...
Muller's ratchet may operate during the evolution of transposons and retroviruses and fix shorter sequences than the initial elements and establish elements that would depend on trans-acting elements for transposition.
This is the only book completely devoted to the popular BLAST (Basic Local Alignment Search Tool), and one that every biologist with an interest in sequence analysis should learn from.
For amplicon deep sequencing analysis, the PCR products were adjusted in four steps: (1) in five target sites (DL-1, DL2, ALS-1, ALS-2, and AAO2-1), crRNAs with short, middle, and long guide sequences were prepared and expressed with ...
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